Summary

The literature section presents previous knowledge about this protein. There have been five different efforts to annotate minimal organism genome. The annotations from those efforts are given in the Literature section for completeness.

AVX54681.1
JCVISYN3A_0248

Uncharacterized protein.
M. mycoides homolog: Q6MTV4.
TIGRfam Classification: 1=Unknown.
Category: Nonessential.

Statistics

Total GO Annotation: 14
Unique PROST Go: 14
Unique BLAST Go: 0
Unique Foldseek Go: 0

Total Homologs: 160
Unique PROST Homologs: 160
Unique BLAST Homologs: 0
Unique Foldseek Homologs: 0

Literature

Danchin and Fang [1]: NA
Yang and Tsui [2]: Uracil-DNA glycosylase Ung
Antczak et al. [3]: Transmembrane protein, likely a cation transporter
Zhang et al. [4]: GO:0015318|inorganic solute uptake transmembrane transporter activity
Bianchi et al. [5]: Unclear

Structures and Sequence Alignment

The best structural homolog that predicted by 5. P was Q9UTQ9 (Signal peptidase complex subunit spc2) with a FATCAT P-Value: 2.23e-05 and RMSD of 3.09 angstrom. The sequence alignment identity is 20.7%.
Structural alignment shown in left. Query protein AVX54681.1 colored as red in alignment, homolog Q9UTQ9 colored as blue. Query protein AVX54681.1 is also shown in right top, homolog Q9UTQ9 showed in right bottom. They are colored based on secondary structures. 

  AVX54681.1 MKVDYSASIVLSFTVFILTLVLFLINFYWLSKVKKIYN--QIK---DQNLEFN-FNKNRYSN---IKSINI---FNCI------FWLCILVIFTILK--F 80
      Q9UTQ9 --------------------------------MPK-YNVSDFKSKFDKEL-TNHFNKNGYKQSFVFEDIRLLIAIACIIPAGLAFGIEYVYGFGVLKSYL 66

  AVX54681.1 KNLLNENFLYELIIIGSIMCEFFIFIILTY---LV-SNLIFVKTEKYLVIVNRLIDLRSVFKIEISERFI----KVIYINAFHT--KSRLWFYNTNNLDQ 170
      Q9UTQ9 KYLLP---LY---FLAS--C------LLTFWSSVVKGSTVYVATKK---------E-RHI-KIS-ADTFLPLKNKPLITTKF-TVLKNR----NAVQLE- 134

  AVX54681.1 WF--ETH-FKELIRKDSQW------------------ 186
      Q9UTQ9 WSVPVAHIFEE----DGQISSATFEAEISKYLSQIEN 167

Go Annotations

1. PBF indicates the go terms that are found by both PROST and BLAST and Foldseek.
2. PF indicates the go terms that are found by only PROST and Foldseek.
3. BF indicates the go terms that are found by only BLAST and Foldseek.
4. PB indicates the go terms that are found by both PROST and BLAST.
5. P indicates the go terms that are found by only PROST.
6. F indicates the go terms that are found by only Foldseek.
7. B indicates the go terms that are found by only BLAST.

Source GO Description
5. P GO:0006465 signal peptide processing
5. P GO:0016021 integral component of membrane
5. P GO:0045047 protein targeting to ER
5. P GO:0005886 plasma membrane
5. P GO:0008233 peptidase activity
5. P GO:0009535 chloroplast thylakoid membrane
5. P GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity
5. P GO:0015979 photosynthesis
5. P GO:0005787 signal peptidase complex
5. P GO:0000506 glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex
5. P GO:0048564 photosystem I assembly
5. P GO:0055035 plastid thylakoid membrane
5. P GO:0031676 plasma membrane-derived thylakoid membrane
5. P GO:0009522 photosystem I

Uniprot GO Annotations

GO Description
GO:0016020 membrane
GO:0016021 integral component of membrane

Homologs

1. PBF indicates the homologs that are found by both PROST and BLAST and Foldseek.
2. PF indicates the homologs that are found by only PROST and Foldseek.
3. BF indicates the homologs that are found by only BLAST and Foldseek.
4. PB indicates the homologs that are found by both PROST and BLAST.
5. P indicates the homologs that are found by only PROST.
6. F indicates the homologs that are found by only Foldseek.
7. B indicates the homologs that are found by only BLAST.

Source Homolog Description Fatcat Pvalue PROST Evalue BLAST Evalue Foldseek TMScore
5. P P81231 Uncharacterized protein MJ0785.1 2.34e-04 3.57e-04 NA NA
5. P A4QLU4 Photosystem I assembly protein Ycf4 8.94e-04 1.17e-02 NA NA
5. P B5R2T8 UPF0266 membrane protein YobD 2.89e-04 8.90e-20 NA NA
5. P Q46JS1 Photosystem I assembly protein Ycf4 5.70e-04 6.01e-04 NA NA
5. P A6MVV6 Photosystem I assembly protein Ycf4 6.11e-04 2.23e-02 NA NA
5. P Q8Z671 UPF0266 membrane protein YobD 4.16e-05 1.13e-19 NA NA
5. P Q321Z7 UPF0266 membrane protein YobD 2.47e-05 3.06e-15 NA NA
5. P O68611 Photosystem I assembly protein Ycf4 7.07e-04 6.48e-03 NA NA
5. P Q96B77 Transmembrane protein 186 2.87e-04 2.73e-02 NA NA
5. P A6TAZ1 UPF0266 membrane protein KPN78578_23010 2.47e-04 2.76e-19 NA NA
5. P A8GFM7 UPF0266 membrane protein Spro_2816 9.79e-05 1.82e-21 NA NA
5. P B5FTK0 UPF0266 membrane protein YobD 2.87e-05 2.90e-19 NA NA
5. P Q319Y1 Photosystem I assembly protein Ycf4 4.53e-04 2.63e-02 NA NA
5. P Q3Z2G1 UPF0266 membrane protein YobD 2.75e-05 1.63e-17 NA NA
5. P Q83L78 UPF0266 membrane protein YobD 1.13e-04 3.06e-15 NA NA
5. P Q5UQT8 Uncharacterized protein R342 NA 9.45e-03 NA NA
5. P Q9MTL1 Photosystem I assembly protein Ycf4 3.78e-04 2.80e-02 NA NA
5. P A2C3V3 Photosystem I assembly protein Ycf4 6.56e-04 1.35e-04 NA NA
5. P A8AFN6 UPF0266 membrane protein CKO_01158 1.65e-04 8.95e-21 NA NA
5. P Q8XCP5 UPF0266 membrane protein YobD 2.77e-05 2.19e-17 NA NA
5. P Q0T513 UPF0266 membrane protein YobD 2.40e-05 3.06e-15 NA NA
5. P B2K0F2 UPF0266 membrane protein YPTS_1754 3.97e-05 6.19e-23 NA NA
5. P C5BDX6 UPF0266 membrane protein NT01EI_1718 9.11e-05 2.03e-19 NA NA
5. P Q9UTQ9 Signal peptidase complex subunit spc2 2.23e-05 2.74e-03 NA NA
5. P B5F3Q9 UPF0266 membrane protein YobD 2.86e-05 7.75e-20 NA NA
5. P Q2WGJ8 Transmembrane protein 249 1.25e-03 3.27e-02 NA NA
5. P A2BXL9 Photosystem I assembly protein Ycf4 5.31e-04 1.61e-03 NA NA
5. P Q8ED56 UPF0208 membrane protein SO_2914 1.26e-03 3.71e-02 NA NA
5. P P81232 Uncharacterized protein MJ0210.1 3.45e-06 4.46e-27 NA NA
5. P A3PDZ6 Photosystem I assembly protein Ycf4 5.01e-04 1.79e-02 NA NA
5. P Q33C22 Photosystem I assembly protein Ycf4 9.19e-04 1.06e-02 NA NA
5. P Q8DJ41 Photosystem I assembly protein Ycf4 4.47e-04 2.65e-02 NA NA
5. P Q8ZFF7 UPF0266 membrane protein YPO1755/y2554/YP_1637 5.47e-05 6.19e-23 NA NA
5. P A7ZMU2 UPF0266 membrane protein YobD 2.66e-05 1.63e-17 NA NA
5. P Q118V7 Photosystem I assembly protein Ycf4 3.89e-04 3.33e-04 NA NA
5. P Q9BBR9 Photosystem I assembly protein Ycf4 1.16e-03 4.51e-02 NA NA
5. P A4QKK3 Photosystem I assembly protein Ycf4 9.59e-04 3.88e-02 NA NA
5. P A4QKU2 Photosystem I assembly protein Ycf4 3.27e-03 4.63e-02 NA NA
5. P C0Q301 UPF0266 membrane protein YobD 5.99e-05 2.62e-19 NA NA
5. P Q9CMJ4 UPF0266 membrane protein PM0830 6.33e-04 6.79e-25 NA NA
5. P Q2JUG5 Photosystem I assembly protein Ycf4 7.77e-04 5.11e-03 NA NA
5. P O28280 Uncharacterized protein AF_1999 3.07e-05 1.06e-02 NA NA
5. P Q1XDR7 Photosystem I assembly protein Ycf4 4.53e-04 4.76e-02 NA NA
5. P A5GUN8 Photosystem I assembly protein Ycf4 5.73e-04 9.45e-03 NA NA
5. P B1J0R8 UPF0266 membrane protein YobD 2.07e-05 1.63e-17 NA NA
5. P Q09X06 Photosystem I assembly protein Ycf4 6.77e-04 5.41e-03 NA NA
5. P A9R5Y6 UPF0266 membrane protein YpAngola_A1654 7.17e-05 6.19e-23 NA NA
5. P B4SV74 UPF0266 membrane protein YobD 2.12e-04 1.52e-19 NA NA
5. P P67602 UPF0266 membrane protein YobD 2.54e-05 1.63e-17 NA NA
5. P Q5RAY6 Signal peptidase complex subunit 2 4.41e-05 1.41e-02 NA NA
5. P B7USJ6 UPF0266 membrane protein YobD 4.93e-05 1.38e-18 NA NA
5. P Q9TM19 Photosystem I assembly protein Ycf4 7.58e-04 6.29e-05 NA NA
5. P Q9NFA0 Signal peptidase complex subunit 2 6.33e-05 2.08e-02 NA NA
5. P A4QJC6 Photosystem I assembly protein Ycf4 9.04e-04 9.63e-03 NA NA
5. P Q0G9K8 Photosystem I assembly protein Ycf4 8.66e-04 1.06e-02 NA NA
5. P B7MVK3 UPF0266 membrane protein YobD 2.61e-05 1.63e-17 NA NA
5. P Q06GY6 Photosystem I assembly protein Ycf4 9.28e-04 1.05e-02 NA NA
5. P P20633 Uncharacterized 23.8 kDa protein in tsf 3'region 2.01e-07 3.29e-04 NA NA
5. P A6BM63 Photosystem I assembly protein Ycf4 3.72e-04 6.86e-03 NA NA
5. P Q7V6I1 Photosystem I assembly protein Ycf4 7.20e-04 1.00e-02 NA NA
5. P P81233 Uncharacterized protein MJ0795.1 2.41e-04 1.00e-10 NA NA
5. P A6MML8 Photosystem I assembly protein Ycf4 7.11e-04 3.91e-02 NA NA
5. P B2U460 UPF0266 membrane protein YobD 1.59e-04 4.35e-17 NA NA
5. P A7MKF9 UPF0266 membrane protein ESA_01432 9.38e-05 5.25e-23 NA NA
5. P B5BHC3 UPF0266 membrane protein YobD 5.85e-05 3.15e-20 NA NA
5. P A6H5I8 Photosystem I assembly protein Ycf4 3.27e-04 3.10e-03 NA NA
5. P A9MNJ0 UPF0266 membrane protein YobD 2.50e-05 1.05e-20 NA NA
5. P Q9CR76 Transmembrane protein 186 5.59e-04 4.74e-03 NA NA
5. P Q32RG6 Photosystem I assembly protein Ycf4 4.98e-04 2.78e-02 NA NA
5. P A1ABY8 UPF0266 membrane protein YobD 3.40e-05 5.03e-17 NA NA
5. P C1L148 UPF0266 membrane protein Lm4b_00795 2.50e-05 1.11e-22 NA NA
5. P P81304 Uncharacterized protein MJ0226.1 3.76e-05 1.57e-33 NA NA
5. P B7M294 UPF0266 membrane protein YobD 2.52e-05 1.63e-17 NA NA
5. P O20030 Photosystem I assembly protein Ycf4 1.50e-03 2.41e-03 NA NA
5. P A4QL30 Photosystem I assembly protein Ycf4 4.62e-04 9.28e-03 NA NA
5. P P53961 Phosphatidylinositol N-acetylglucosaminyltransferase subunit GPI15 2.22e-02 2.24e-06 NA NA
5. P A8G5U6 Photosystem I assembly protein Ycf4 4.42e-04 5.02e-03 NA NA
5. P Q5EA03 Transmembrane protein 186 2.94e-04 7.27e-04 NA NA
5. P Q2JHG9 Photosystem I assembly protein Ycf4 8.42e-04 4.56e-03 NA NA
5. P B7LPM7 UPF0266 membrane protein YobD 4.30e-05 4.22e-19 NA NA
5. P Q19V70 Photosystem I assembly protein Ycf4 5.66e-04 4.39e-03 NA NA
5. P B5YQW1 UPF0266 membrane protein YobD 4.28e-05 2.19e-17 NA NA
5. P A4WBH8 UPF0266 membrane protein Ent638_2389 1.61e-04 5.40e-20 NA NA
5. P Q0G9V1 Photosystem I assembly protein Ycf4 8.58e-04 1.83e-02 NA NA
5. P B4TKG4 UPF0266 membrane protein YobD 1.28e-04 6.99e-20 NA NA
5. P Q1KVR7 Photosystem I assembly protein Ycf4 1.37e-04 2.08e-03 NA NA
5. P Q58107 Uncharacterized protein MJ0696 6.00e-06 1.49e-32 NA NA
5. P Q92DP0 UPF0266 membrane protein lin0773 2.40e-05 3.99e-24 NA NA
5. P A4QLB7 Photosystem I assembly protein Ycf4 8.60e-04 1.17e-02 NA NA
5. P Q2QD78 Photosystem I assembly protein Ycf4 6.15e-04 3.12e-02 NA NA
5. P P51220 Photosystem I assembly protein Ycf4 5.59e-04 2.66e-03 NA NA
5. P A8W3J4 Photosystem I assembly protein Ycf4 4.26e-04 3.42e-02 NA NA
5. P Q8Y8W3 UPF0266 membrane protein lmo0779 2.44e-05 1.11e-22 NA NA
5. P P67601 UPF0266 membrane protein YobD 2.51e-05 1.63e-17 NA NA
5. P Q7VB45 Photosystem I assembly protein Ycf4 1.08e-03 4.09e-05 NA NA
5. P A4QJU4 Photosystem I assembly protein Ycf4 8.97e-04 4.59e-02 NA NA
5. P B7NSA1 UPF0266 membrane protein YobD 2.48e-05 1.63e-17 NA NA
5. P Q57NH8 UPF0266 membrane protein YobD 1.11e-04 6.99e-20 NA NA
5. P B1JP58 UPF0266 membrane protein YPK_2467 1.03e-04 6.19e-23 NA NA
5. P B4TY03 UPF0266 membrane protein YobD 2.67e-04 6.99e-20 NA NA
5. P Q5BJI9 Probable signal peptidase complex subunit 2 8.47e-05 5.19e-06 NA NA
5. P A2BS56 Photosystem I assembly protein Ycf4 4.99e-04 1.70e-02 NA NA
5. P A1JM96 UPF0266 membrane protein YE1773 2.07e-05 1.07e-24 NA NA
5. P Q5M8Y1 Probable signal peptidase complex subunit 2 1.28e-04 1.40e-02 NA NA
5. P P58684 Probable signal peptidase complex subunit 2 8.68e-05 5.06e-03 NA NA
5. P A4QKB6 Photosystem I assembly protein Ycf4 9.12e-04 4.63e-02 NA NA
5. P O78467 Photosystem I assembly protein Ycf4 5.64e-04 1.10e-03 NA NA
5. P B8DGI9 UPF0266 membrane protein LMHCC_1856 2.37e-05 1.11e-22 NA NA
5. P B1LD53 UPF0266 membrane protein YobD 2.66e-05 1.63e-17 NA NA
5. P Q08793 Uncharacterized protein YcxB 6.97e-04 2.02e-06 NA NA
5. P A9MVT3 UPF0266 membrane protein YobD 1.68e-04 1.77e-18 NA NA
5. P Q66BY5 UPF0266 membrane protein YPTB1631 7.63e-05 6.19e-23 NA NA
5. P Q7V0U6 Photosystem I assembly protein Ycf4 5.59e-04 3.13e-03 NA NA
5. P Q7N3L5 UPF0266 membrane protein plu2700 5.78e-05 1.01e-27 NA NA
5. P Q32F39 UPF0266 membrane protein YobD 2.55e-05 1.63e-17 NA NA
5. P Q0TH13 UPF0266 membrane protein YobD 2.72e-05 5.03e-17 NA NA
5. P Q1RAX0 UPF0266 membrane protein YobD 2.77e-05 5.03e-17 NA NA
5. P B7NBG6 UPF0266 membrane protein YobD 2.01e-05 1.63e-17 NA NA
5. P A6MMD3 Photosystem I assembly protein Ycf4 7.26e-04 3.10e-02 NA NA
5. P Q9VYY2 Signal peptidase complex subunit 2 4.58e-05 3.42e-02 NA NA
5. P B1XH87 UPF0266 membrane protein YobD 2.49e-05 1.63e-17 NA NA
5. P Q5PI76 UPF0266 membrane protein YobD 2.71e-04 3.15e-20 NA NA
5. P B7MBM6 UPF0266 membrane protein YobD 2.79e-05 5.03e-17 NA NA
5. P Q2NTC6 UPF0266 membrane protein SG1324 4.25e-05 5.11e-26 NA NA
5. P A4QLK5 Photosystem I assembly protein Ycf4 7.93e-04 1.04e-02 NA NA
5. P B3DI94 Transmembrane protein 186 9.06e-03 1.65e-02 NA NA
5. P Q9CQE2 Transmembrane protein 223 1.23e-04 6.07e-04 NA NA
5. P Q1C8X8 UPF0266 membrane protein YPA_1127 5.13e-05 6.19e-23 NA NA
5. P Q6B8P5 Photosystem I assembly protein Ycf4 5.89e-04 2.68e-02 NA NA
5. P Q722D6 UPF0266 membrane protein LMOf2365_0797 2.31e-05 1.11e-22 NA NA
5. P Q5N3Q6 Photosystem I assembly protein Ycf4 5.28e-04 1.13e-02 NA NA
5. P Q8ZP01 UPF0266 membrane protein YobD 2.67e-05 1.83e-19 NA NA
5. P Q1CH34 UPF0266 membrane protein YPN_2368 1.08e-04 6.19e-23 NA NA
5. P A2T344 Photosystem I assembly protein Ycf4 1.25e-03 3.58e-02 NA NA
5. P A8A117 UPF0266 membrane protein YobD 1.99e-05 1.63e-17 NA NA
5. P A9L9A7 Photosystem I assembly protein Ycf4 1.05e-03 1.25e-02 NA NA
5. P P56788 Photosystem I assembly protein Ycf4 1.43e-03 4.63e-02 NA NA
5. P Q55E35 Signal peptidase complex subunit 2 3.28e-05 1.98e-02 NA NA
5. P Q9XWW1 Probable signal peptidase complex subunit 2 5.13e-05 3.84e-05 NA NA
5. P Q58213 Uncharacterized protein MJ0803 2.08e-06 6.04e-34 NA NA
5. P A4TKE6 UPF0266 membrane protein YPDSF_1369 6.99e-05 6.19e-23 NA NA
5. P B7L6U8 UPF0266 membrane protein YobD 2.52e-05 1.63e-17 NA NA
5. P Q332W7 Photosystem I assembly protein Ycf4 9.85e-04 3.07e-02 NA NA
5. P Q6D4K2 UPF0266 membrane protein ECA2388 6.96e-05 2.55e-21 NA NA
5. P Q31QI3 Photosystem I assembly protein Ycf4 7.01e-04 9.02e-03 NA NA
5. P Q1KXU8 Photosystem I assembly protein Ycf4 8.97e-04 2.14e-03 NA NA
5. P A0AGM5 UPF0266 membrane protein lwe0739 2.41e-05 2.85e-24 NA NA
5. P Q4G3A9 Photosystem I assembly protein Ycf4 3.45e-04 1.69e-03 NA NA
5. P P25412 Photosystem I assembly protein Ycf4 4.71e-04 4.39e-02 NA NA
5. P B6IBP7 UPF0266 membrane protein YobD 2.45e-05 1.63e-17 NA NA
5. P B5XQ53 UPF0266 membrane protein KPK_1957 8.77e-05 2.99e-20 NA NA
5. P A4QK29 Photosystem I assembly protein Ycf4 9.38e-04 1.27e-02 NA NA
5. P Q615A2 Probable signal peptidase complex subunit 2 2.45e-05 4.80e-04 NA NA
5. P Q09MG7 Photosystem I assembly protein Ycf4 6.85e-04 3.61e-02 NA NA
5. P A2C7Y6 Photosystem I assembly protein Ycf4 7.33e-04 6.93e-03 NA NA
5. P P56312 Photosystem I assembly protein Ycf4 7.16e-04 4.18e-03 NA NA
5. P P81230 Uncharacterized protein MJ1249.1 5.25e-04 3.96e-05 NA NA
5. P A4QJL0 Photosystem I assembly protein Ycf4 9.77e-04 1.27e-02 NA NA
5. P A7FJB2 UPF0266 membrane protein YpsIP31758_2371 4.24e-05 6.19e-23 NA NA
5. P C4ZZH6 UPF0266 membrane protein YobD 2.49e-05 1.63e-17 NA NA