Summary
The literature section presents previous knowledge about this protein. There have been five different efforts to annotate minimal organism genome. The annotations from those efforts are given in the Literature section for completeness.
AVX54757.1
JCVISYN3A_0389
Uncharacterized protein.
M. mycoides homolog: Q6MTF9.
TIGRfam Classification: 1=Unknown.
Category: Quasiessential.
Statistics
Total GO Annotation: 9
Unique PROST Go: 9
Unique BLAST Go: 0
Unique Foldseek Go: 0
Total Homologs: 14
Unique PROST Homologs: 11
Unique BLAST Homologs: 0
Unique Foldseek Homologs: 0
Structures and Sequence Alignment
The best structural homolog that predicted by was
() with a FATCAT P-Value: NA and RMSD of angstrom. The sequence alignment identity is NA.
Structural alignment shown in left. Query protein AVX54757.1 colored as red in alignment, homolog colored as blue.
Query protein AVX54757.1 is also shown in right top, homolog showed in right bottom. They are colored based on secondary structures.
Go Annotations
1. PBF indicates the go terms that are found by both PROST and BLAST and Foldseek.
2. PF indicates the go terms that are found by only PROST and Foldseek.
3. BF indicates the go terms that are found by only BLAST and Foldseek.
4. PB indicates the go terms that are found by both PROST and BLAST.
5. P indicates the go terms that are found by only PROST.
6. F indicates the go terms that are found by only Foldseek.
7. B indicates the go terms that are found by only BLAST.
| Source | GO | Description |
|---|---|---|
| 5. P | GO:0003723 | RNA binding |
| 5. P | GO:0030430 | host cell cytoplasm |
| 5. P | GO:0039724 | suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of IKBKE activity |
| 5. P | GO:0019013 | viral nucleocapsid |
| 5. P | GO:0039689 | negative stranded viral RNA replication |
| 5. P | GO:0019029 | helical viral capsid |
| 5. P | GO:0039696 | RNA-templated viral transcription |
| 5. P | GO:0046872 | metal ion binding |
| 5. P | GO:0016787 | hydrolase activity |
Uniprot GO Annotations
| GO | Description |
|---|
Homologs
1. PBF indicates the homologs that are found by both PROST and BLAST and Foldseek.
2. PF indicates the homologs that are found by only PROST and Foldseek.
3. BF indicates the homologs that are found by only BLAST and Foldseek.
4. PB indicates the homologs that are found by both PROST and BLAST.
5. P indicates the homologs that are found by only PROST.
6. F indicates the homologs that are found by only Foldseek.
7. B indicates the homologs that are found by only BLAST.
| Source | Homolog | Description | Fatcat Pvalue | PROST Evalue | BLAST Evalue | Foldseek TMScore |
|---|---|---|---|---|---|---|
| 1. PBF | P75234 | Uncharacterized protein MG366 homolog | 3.25e-07 | 1.33e-50 | 2.95e-06 | 0.6023 |
| 1. PBF | P47606 | Uncharacterized protein MG366 | 6.30e-07 | 2.44e-51 | 3.46e-05 | 0.5716 |
| 1. PBF | Q9PQX0 | Uncharacterized protein UU173 | 2.79e-06 | 3.18e-60 | 1.45e-06 | 0.5682 |
| 5. P | J7H5M4 | Nucleoprotein | NA | 1.87e-04 | NA | NA |
| 5. P | Q2A068 | Nucleoprotein | NA | 1.37e-03 | NA | NA |
| 5. P | A0PJ26 | Nucleoprotein | NA | 1.00e-03 | NA | NA |
| 5. P | P03541 | Nucleoprotein | NA | 8.98e-05 | NA | NA |
| 5. P | Q8BDE5 | Nucleoprotein | NA | 2.91e-04 | NA | NA |
| 5. P | Q8BDE4 | Nucleoprotein | NA | 2.29e-02 | NA | NA |
| 5. P | Q90038 | Nucleoprotein | NA | 6.54e-06 | NA | NA |
| 5. P | Q91PB2 | Nucleoprotein | NA | 2.89e-03 | NA | NA |
| 5. P | Q27YE3 | Nucleoprotein | NA | 2.54e-02 | NA | NA |
| 5. P | P18140 | Nucleoprotein | NA | 1.52e-03 | NA | NA |
| 5. P | P07400 | Nucleoprotein | NA | 4.15e-04 | NA | NA |