Summary
The literature section presents previous knowledge about this protein. There have been five different efforts to annotate minimal organism genome. The annotations from those efforts are given in the Literature section for completeness.
AVX54824.1
JCVISYN3A_0503
Uncharacterized protein.
M. mycoides homolog: Q6MT47.
TIGRfam Classification: 1=Unknown.
Category: Quasiessential.
Statistics
Total GO Annotation: 3
Unique PROST Go: 3
Unique BLAST Go: 0
Unique Foldseek Go: 0
Total Homologs: 3
Unique PROST Homologs: 3
Unique BLAST Homologs: 0
Unique Foldseek Homologs: 0
Structures and Sequence Alignment
The best structural homolog that predicted by 5. P was
P22522
(Colicin-V) with a FATCAT P-Value: 0.0336 and RMSD of 1.07 angstrom. The sequence alignment identity is 23.3%.
Structural alignment shown in left. Query protein AVX54824.1 colored as red in alignment, homolog P22522 colored as blue.
Query protein AVX54824.1 is also shown in right top, homolog P22522 showed in right bottom. They are colored based on secondary structures.
AVX54824.1 MKEINLENTKEIIGGA-G--VS---GALINGIAKVVESGFEGVSNLITDIASVGFAFY-QAS--K-NPIKADYKIGNNSFKIDNTKLVDLKIQQAKAQEI 90 P22522 MRTLTLNELDSVSGGASGRDIAMAIGTL-SG--QFV-AG--GIGAAAGGVA--GGAIYDYASTHKPNPAMSPSGLG-------GT----IK-Q--KPE-- 76 AVX54824.1 KIPVLEIGNNKNNIKI-NYNDAYNN--DEQISNIYNDFDQNISIFN 133 P22522 GIPS-EAWNYAAG-RLCNWSP--NNLSDVCL--------------- 103
Go Annotations
1. PBF indicates the go terms that are found by both PROST and BLAST and Foldseek.
2. PF indicates the go terms that are found by only PROST and Foldseek.
3. BF indicates the go terms that are found by only BLAST and Foldseek.
4. PB indicates the go terms that are found by both PROST and BLAST.
5. P indicates the go terms that are found by only PROST.
6. F indicates the go terms that are found by only Foldseek.
7. B indicates the go terms that are found by only BLAST.
| Source | GO | Description |
|---|---|---|
| 5. P | GO:0019835 | cytolysis |
| 5. P | GO:0042742 | defense response to bacterium |
| 5. P | GO:0016021 | integral component of membrane |
Uniprot GO Annotations
| GO | Description |
|---|
Homologs
1. PBF indicates the homologs that are found by both PROST and BLAST and Foldseek.
2. PF indicates the homologs that are found by only PROST and Foldseek.
3. BF indicates the homologs that are found by only BLAST and Foldseek.
4. PB indicates the homologs that are found by both PROST and BLAST.
5. P indicates the homologs that are found by only PROST.
6. F indicates the homologs that are found by only Foldseek.
7. B indicates the homologs that are found by only BLAST.