Summary
The literature section presents previous knowledge about this protein. There have been five different efforts to annotate minimal organism genome. The annotations from those efforts are given in the Literature section for completeness.
AVX54995.1
JCVISYN3A_0835
Uncharacterized lipoprotein.
M. mycoides homolog: Q6MS25.
TIGRfam Classification: 1=Unknown.
Category: Essential.
Statistics
Total GO Annotation: 3
Unique PROST Go: 3
Unique BLAST Go: 0
Unique Foldseek Go: 0
Total Homologs: 35
Unique PROST Homologs: 35
Unique BLAST Homologs: 0
Unique Foldseek Homologs: 0
Structures and Sequence Alignment
The best structural homolog that predicted by was
() with a FATCAT P-Value: NA and RMSD of angstrom. The sequence alignment identity is NA.
Structural alignment shown in left. Query protein AVX54995.1 colored as red in alignment, homolog colored as blue.
Query protein AVX54995.1 is also shown in right top, homolog showed in right bottom. They are colored based on secondary structures.
Go Annotations
1. PBF indicates the go terms that are found by both PROST and BLAST and Foldseek.
2. PF indicates the go terms that are found by only PROST and Foldseek.
3. BF indicates the go terms that are found by only BLAST and Foldseek.
4. PB indicates the go terms that are found by both PROST and BLAST.
5. P indicates the go terms that are found by only PROST.
6. F indicates the go terms that are found by only Foldseek.
7. B indicates the go terms that are found by only BLAST.
| Source | GO | Description |
|---|---|---|
| 5. P | GO:0005886 | plasma membrane |
| 5. P | GO:0009279 | cell outer membrane |
| 5. P | GO:0016021 | integral component of membrane |
Uniprot GO Annotations
| GO | Description |
|---|
Homologs
1. PBF indicates the homologs that are found by both PROST and BLAST and Foldseek.
2. PF indicates the homologs that are found by only PROST and Foldseek.
3. BF indicates the homologs that are found by only BLAST and Foldseek.
4. PB indicates the homologs that are found by both PROST and BLAST.
5. P indicates the homologs that are found by only PROST.
6. F indicates the homologs that are found by only Foldseek.
7. B indicates the homologs that are found by only BLAST.
| Source | Homolog | Description | Fatcat Pvalue | PROST Evalue | BLAST Evalue | Foldseek TMScore |
|---|---|---|---|---|---|---|
| 5. P | Q50274 | Lipoprotein A | 8.44e-01 | 1.38e-03 | NA | NA |
| 5. P | P75158 | Uncharacterized protein MPN_639 | 6.89e-01 | 4.15e-04 | NA | NA |
| 5. P | Q2FJJ6 | Uncharacterized lipoprotein SAUSA300_0419 | 6.43e-01 | 1.56e-02 | NA | NA |
| 5. P | P75281 | Uncharacterized protein MPN_505 | 5.50e-01 | 2.38e-02 | NA | NA |
| 5. P | Q2G0X1 | Uncharacterized lipoprotein SAOUHSC_00402 | 6.18e-01 | 3.25e-02 | NA | NA |
| 5. P | P75181 | Uncharacterized protein MPN_614 | 7.18e-01 | 5.35e-09 | NA | NA |
| 5. P | P75157 | Uncharacterized lipoprotein MG439 homolog 5 | 6.13e-01 | 2.89e-03 | NA | NA |
| 5. P | P75412 | Uncharacterized lipoprotein MPN_369 | 6.34e-01 | 2.03e-05 | NA | NA |
| 5. P | Q8NY35 | Uncharacterized lipoprotein MW0401 | 6.44e-01 | 9.94e-04 | NA | NA |
| 5. P | Q99WG0 | Uncharacterized lipoprotein SAV0442 | 7.60e-01 | 9.92e-05 | NA | NA |
| 5. P | P70904 | Variable large protein 23 | 4.64e-01 | 3.67e-02 | NA | NA |
| 5. P | Q2FK59 | Uncharacterized protein SAUSA300_0205 | 6.51e-01 | 1.47e-04 | NA | NA |
| 5. P | Q932K6 | Uncharacterized protein SAV0210 | 5.52e-01 | 5.94e-03 | NA | NA |
| 5. P | P75072 | Uncharacterized protein MPN_042 | 6.46e-01 | 3.92e-02 | NA | NA |
| 5. P | Q6GCR5 | Uncharacterized protein SAS0186 | 6.01e-01 | 5.94e-03 | NA | NA |
| 5. P | Q7A7G1 | Uncharacterized lipoprotein SA0402 | 7.57e-01 | 9.92e-05 | NA | NA |
| 5. P | Q8NYK8 | Uncharacterized protein MW0186 | 5.56e-01 | 5.94e-03 | NA | NA |
| 5. P | P75102 | Uncharacterized lipoprotein MPN_011 | 4.89e-01 | 1.51e-06 | NA | NA |
| 5. P | Q6GJN0 | Uncharacterized lipoprotein SAR0443 | 7.61e-01 | 7.03e-03 | NA | NA |
| 5. P | Q8NUV7 | Uncharacterized protein MW2407 | 4.90e-01 | 3.57e-03 | NA | NA |
| 5. P | Q2FJJ8 | Uncharacterized lipoprotein SAUSA300_0417 | 5.77e-01 | 9.81e-03 | NA | NA |
| 5. P | P0DI98 | Lipoprotein p33 | 7.47e-01 | 4.95e-02 | NA | NA |
| 5. P | P75152 | Uncharacterized lipoprotein MG439 homolog 2 | 6.17e-01 | 1.56e-02 | NA | NA |
| 5. P | Q5HJG9 | Uncharacterized protein SACOL0189 | 6.55e-01 | 1.47e-04 | NA | NA |
| 5. P | O34629 | Uncharacterized lipoprotein YerH | 6.47e-01 | 9.62e-03 | NA | NA |
| 5. P | Q2G1F3 | Uncharacterized protein SAOUHSC_00172 | 5.66e-01 | 1.46e-04 | NA | NA |
| 5. P | Q5HIN3 | Uncharacterized lipoprotein SACOL0484 | 4.79e-01 | 9.81e-03 | NA | NA |
| 5. P | Q99WG2 | Uncharacterized lipoprotein SA0400 | 6.32e-01 | 2.45e-02 | NA | NA |
| 5. P | Q99X12 | Uncharacterized protein SA0203 | 5.99e-01 | 3.50e-03 | NA | NA |
| 5. P | P75150 | Uncharacterized lipoprotein MG439 homolog 1 | 5.40e-01 | 2.53e-03 | NA | NA |
| 5. P | Q932G7 | Uncharacterized lipoprotein SAV0440 | 7.17e-01 | 4.81e-02 | NA | NA |
| 5. P | Q6GC44 | Uncharacterized lipoprotein SAS0403 | 4.74e-01 | 9.94e-04 | NA | NA |
| 5. P | Q8CU18 | Uncharacterized lipoprotein SE_0145 | 7.11e-01 | 8.47e-03 | NA | NA |
| 5. P | P75079 | Uncharacterized protein MPN_035 | 6.65e-01 | 5.52e-04 | NA | NA |
| 5. P | P47341 | Uncharacterized lipoprotein MG095 | 3.14e-01 | 5.22e-03 | NA | NA |